Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015948806.1_cds_XP_016489973.1_80441
CDS Infomation

[gene=LOC107809795] [db_xref=GeneID:107809795] [protein=carboxypeptidase SOL1] [protein_id=XP_016489973.1] [location=join(3981..4080,4362..4452,4580..4675,5765..5795,5914..5970,7173..7268,8330..8452,10064..10168,10837..10883,11086..11211,11351..11453,11732..11794,12643..12726,12823..12886,13848..14125)] [gbkey=CDS]
Sequence

ATGATGAATCTCTTCTTCTTTCTATTCTCTCTTCTATTTTCTTCCCTTTTTCATCTCACT
TTCGCCAGAGGCGGCTTTCGCAGCTCCACTAATCTATCAGGTATTGTCAATAGTAATTCT
GCAGCTTCAGCTAGACATTTATTTGCCGATATCAATGTTCCTTTCTCTGAGGAACAGCAC
TTGAAAAGACTTGAAGAATTAGCAAAAGATTACATGTCAAATACTGATATTGAGAATGCT
ATCATGTCATTGAACCGTAGGTGCAGTACGATATCCAGAGTCTACAGCATTGGAAAGAGT
GTGCTGGGAGTTCCATTGTGGGTGATGGAAATTTCTGACAAGCCAGGCAAGGAAGAGGCT
GAGCCTGCTTTTAAGTACATTGGCAACGTGCATGGGGATGAACCTGTAGGTCGTGAGCTT
CTAATTCTTCTGGCCAACTGGCTTTGTGATAATTATATGAAGGATCCCTTGGCTACCCTG
ATTGTAGACAATGTTCATCTTCACATACTTCCATCGATGAATCCAGATGGGTTTTCATTG
AGGAGGCGTGGAAATGCGAACAATGTCGATTTGAACCGAGACTTTCCTGACCAGTTCTTT
CCCATTAATGATGATCCTGGCGCACATCAACCTGAAACAAAAGCCATTATGCGTTGGTTG
GAGGAAATGCACTTCACAGCATCTGCTAGTCTGCATGGGGGAGCACTTGTAGCAAATTAT
CCATGGGATGGAACTGAGAACAAAAGAAAATATTATTATGGCTGTCCAGATGATGAAACA
TTCAGAAACATGGCTAGCATCTACAGTCATTCCCACCATAACATGTCTCTAAGCAAGGAG
TTTCCAGGAGGAATTACAAATGGTGCATATTGGTATCCAATCTATGGAGGAATGCAAGAC
TGGAATTACTTACTTGCTGGTTGCTTTGAACTGACTCTAGAGATTAGTGATGACAAATGG
CCTAACGCACGTGAGCTTCCTACTCTTTTTGAGTACAACAGAATGAGTATGCTCAATCTT
GTCGCGAGCCTTGTGAAGACAGGAATACACGGAAGGATTTTCTCATCAGATGAAGGCAGG
CCTTTACCTGCCTCAATAACTATAACAGGAATAAATTCCACGATACATGCAAGGGAAACA
TCAGCTGATTACCACCGCTTGCTGGCCCCTGGGGGGAATTATGAAGTTGTAGCAACAATG
CCAGGATACAAGTCGAGGAGTACAAGAATTATGTTGGGGGAAGAAGCGATGACGGTGGAT
TTTGTTATGGAACCAGTAATCACTCCCATAAATGGCTTTTTGCAAAGGGGATGGAGTTGC
AGCTTACCAGGTCCTCAGTTAGAAGTTTTTTTCATTTTGGTTTTGGTATTAGTCTCAGTA
TTCCTCTGCTTTTTATTGAAGAGGAGAGTAGTATTAAACTATCCAAAACAGAGACAAACA
AAAAGGTCTGTTCTTGGAGTATGA

Peptide Sequence

PEP ID

XP_016489973.1
PEP Infomation

PREDICTED: carboxypeptidase SOL1 [Nicotiana tabacum]
Sequence

MMNLFFFLFSLLFSSLFHLTFARGGFRSSTNLSGIVNSNSAASARHLFADINVPFSEEQH
LKRLEELAKDYMSNTDIENAIMSLNRRCSTISRVYSIGKSVLGVPLWVMEISDKPGKEEA
EPAFKYIGNVHGDEPVGRELLILLANWLCDNYMKDPLATLIVDNVHLHILPSMNPDGFSL
RRRGNANNVDLNRDFPDQFFPINDDPGAHQPETKAIMRWLEEMHFTASASLHGGALVANY
PWDGTENKRKYYYGCPDDETFRNMASIYSHSHHNMSLSKEFPGGITNGAYWYPIYGGMQD
WNYLLAGCFELTLEISDDKWPNARELPTLFEYNRMSMLNLVASLVKTGIHGRIFSSDEGR
PLPASITITGINSTIHARETSADYHRLLAPGGNYEVVATMPGYKSRSTRIMLGEEAMTVD
FVMEPVITPINGFLQRGWSCSLPGPQLEVFFILVLVLVSVFLCFLLKRRVVLNYPKQRQT
KRSVLGV

Transcript Sequence

Gene sequence data has not been registered.